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2.A.3.4.2
γ-aminobutyric acid (GABA) permease, GabA

Accession Number:Q9Y860
Protein Name:GabA
Length:517
Molecular Weight:55381.00
Species:Emericella nidulans (Aspergillus nidulans) [162425]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Gamma-aminobutyric acid

Cross database links:

Pfam: PF00324   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0015171 F:amino acid transmembrane transporter activity
GO:0006865 P:amino acid transport
GO:0055085 P:transmembrane transport

References (1)

[1] “The multiply-regulated gabA gene encoding the GABA permease of Aspergillus nidulans: a score of exons.”  Hutchings H.et.al.   10320578

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKDIPAADDI QLAALGHKAE LKRNFSMLSM LGLAFAILNS WTALSTSLNL SLPSGGCTSV 
61:	VWGLVTAGVC NICTAASLAE FLSAWPTAGG QYHWVAAISW KRQMPMLSWV TGWANVAGWL 
121:	ALTATGGLLS STLIGGIIGL VYPLFEFQRW HQFLIYIAIN IIAFAINAFM NVGLPLVTKS 
181:	AFIWSLTGFV VISITILSCA SPDYNSGKFV FGEFINTTGW PDGVAWLLGL LQGGFGLTGF 
241:	DGVAHMIEEI PNPTVLGPRI MIGCVCIGIT TGLIFLIVLL FVAGDINLVI ESAATPLLQI 
301:	FHDATNSNAG SICLLMFPLV CTVFAATTIM TTSSRMVYAF ARDGGLPASP FFSRVHPKLQ 
361:	VPLNGLYLTM FCVIVFGCIF LGSSSAFNAI TSSSVVMLDV AYGIPIAINC LRGRQMIPER 
421:	AFVLPQALGW MVNLIALAYI SLTTVLFLFP PELPVTGSNM NYCVAAFGIV LIISAFQWIV 
481:	DGRKHFTGPR VDAEVLAAVE SYSGPNIDGA AEIREQK