TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.3.6.4
Inner membrane transport protein YbaT

Accession Number:P77400
Protein Name:Inner membrane transport protein YbaT
Length:430
Molecular Weight:45659.00
Species:Escherichia coli (strain K12) [83333]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

Genevestigator: P77400
EchoBASE: EB3037
EcoGene: EG13248
eggNOG: COG0531
HEGENOM: HOG000050034
DIP: DIP-11308N
Entrez Gene ID: 945363   
KEGG: eco:b0486   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015171 F:amino acid transmembrane transporter activity

References (3)

[1] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[2] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[3] “Global topology analysis of the Escherichia coli inner membrane proteome.”  Daley D.O.et.al.   15919996

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MMNTEGNNGN KPLGLWNVVS IGIGAMVGAG IFALLGQAAL LMEASTWVAF AFGGIVAMFS 
61:	GYAYARLGAS YPSNGGIIDF FRRGLGNGVF SLALSLLYLL TLAVSIAMVA RAFGAYAVQF 
121:	LHEGSQEEHL ILLYALGIIA VMTLFNSLSN HAVGRLEVIL VGIKMMILLL LIIAGVWSLQ 
181:	PAHISVSAPP SSGAFFSCIG ITFLAYAGFG MMANAADKVK DPQVIMPRAF LVAIGVTTLL 
241:	YISLALVLLS DVSALELEKY ADTAVAQAAS PLLGHVGYVI VVIGALLATA SAINANLFAV 
301:	FNIMDNMGSE RELPKLMNKS LWRQSTWGNI IVVVLIMLMT AALNLGSLAS VASATFLICY 
361:	LAVFVVAIRL RHDIHASLPI LIVGTLVMLL VIVGFIYSLW SQGSRALIWI IGSLLLSLIV 
421:	AMVMKRNKTV