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2.A.3.7.7
Putriscine/agmatine transporter of 466 aas and 12 TMSs, AguD or YrfD (Trip et al. 2013).

Accession Number:F2HL33
Protein Name:YrfD protein
Length:466
Molecular Weight:51082.00
Species:Lactococcus lactis subsp. lactis (strain CV56) [929102]
Number of TMSs:12
Substrate Putriscine, Agmatine

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MENGKKKFSL FSAILSVICV VFVAEAAAPV AAIGNSQFFW WIVLIVAFLL PYGLITSELG 
61:	TTYTGEGGLY DWITKAFGHR WGARASWFYW VNFPLWMASL AVLCPDLLQT MFGFQLNTGI 
121:	SLLIELIFIW VIVLISLYPV SDSVWILNGG AVIKVFLALA LGGLGVYSAL TKGVANHYTL 
181:	ASLLPSFDLH SLSFISVIIF NLLGFEVICT FADSMENPKK QIPQSIIIGG IVIAAIYMFS 
241:	AFGIGVAIPT NKLSTSSGLV DSFQVMLGTP TGWFISLIAF LFMLTLVGNM VSWSQGVNNI 
301:	ASYAADNGDM PKFFSKRRAS NGISWGAALM NGIVATFIVV IAPLLPNQDL FWSFFSLNLV 
361:	LFLLSYIPVF PAFYKLRKID PETPRPFKVS GSDGILKVYM ALPMIIIIIS LIFTAIPLQY 
421:	DKASLTEQLP ITIGAIIFIV IGELIIKRKL QVQVSQPSSS HMNSYS