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2.A.39.1.2
The putative hydroxymethylpyrimidine transporter, CytX (Rodionov et al. 2002)

Accession Number:B1JAG2
Protein Name:Hydroxymethylpyrimidine transporter CytX
Length:427
Molecular Weight:44947.00
Species:Pseudomonas putida (strain W619) [390235]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Hydroxymethylpyrimidine

Cross database links:

HEGENOM: HBG373854
RefSeq: YP_001751559.1   
Entrez Gene ID: 6113695   
Pfam: PF02133   
KEGG: ppw:PputW619_47   

Gene Ontology

GO:0016020 C:membrane
GO:0015205 F:nucleobase transmembrane transporter activity
GO:0015931 P:nucleobase, nucleoside, nucleotide and nucl...
GO:0055085 P:transmembrane transport

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MTTPSHFSPD HPVPTSQRPF GGRDLFSLWF SLGIGLMVLQ VGAMLAPGLG LAGAVLAIAL 
61:	GTGVGVLLLG AAGVIGSDTG LCAMATLRLS LGSHGARLPA LLNLLQLVGW GAFEIIVMRD 
121:	AASLLGARTF GEGSLWNSPM FWTLCFGGLA TLLAVSGPLA FVRKVLRKWG IWLLLGACLW 
181:	LTWNLFAKAD LGELWQRSGD GSMSLAVGFD IVIAMPLSWL PLIADYSRFA RSARRVFGGT 
241:	VLGYFIGNTW LMSLGVAYTL AFAPSGEVNA LLLALAGAGL GIPLLLILLD ESEKAFADIH 
301:	SAAVSTGLLV RLKVEYLALG IGVLCTLIAL LAPLAQYENF LLLIGSVFAP LFGVVLTDHF 
361:	VIRRRRLPAQ IDGLHWQALL AWAVGVVVYH SIAAQAPELG ATLPALLLAG GLHALLSLSR 
421:	GRGTVQA