TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.43.2.11
The probable vacuolar amino acid transporter Ypq1 of 381 aas and 6 TMSs

Accession Number:823139245
Protein Name:PREDICTED: probable vacuolar amino acid transporter YPQ1 [Gossypium raimondii]
Length:382
Molecular Weight:
Species:Gossypium raimondii [29730]
Number of TMSs:6
Substrate Amino acids

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSQPYCVREN KPCTGWVQRY FKDCLCNLKD EFSFGFGIIS LVCWGVAEIP QIITNFKTKS 
61:	AHGVSLLFLL TWVAGDVFNL VGCLLEPATL PTQFYTALLY TISTVVLVLQ SVYYDYINRW 
121:	WKCRRIKTND VVEDEKEPLK PGKHEPGIPI PKSSSKPHPR REFYYTSARS LAGSGTPPFR 
181:	TYLRVAKSGP SALGLDGDSS SDDETVSVLS KKSGTQPRPI PRAAKSYGTF LAASLNLPFG 
241:	SKALMEVKTG FTNRRLLQEH SMEHSAFGQW LGWLMAAIYM GGRIPQIWLN IKRGNVEGLN 
301:	PLMFIFALIA NATYVASILV RTTEWGPIKA NMPWLLDAVV CVALDLFIIL QYIYYKYFRQ 
361:	TDNSDGEDYG DYKEANKEVN P