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2.A.49.6.2
Voltage-gated Cl- channel, ClC chloride channel core, CCC

Accession Number:C5D215
Protein Name:Chloride channel core
Length:595
Molecular Weight:62779.00
Species:Variovorax paradoxus (strain S110) [543728]
Number of TMSs:12
Substrate Cl-

Cross database links:

eggNOG: COG0038
HEGENOM: HOG000198171
Entrez Gene ID: 7975697   
Pfam: PF00571    PF00654   
KEGG: vap:Vapar_6375   

Gene Ontology

GO:0016020 C:membrane
GO:0003824 F:catalytic activity
GO:0005247 F:voltage-gated chloride channel activity

References (1)

[1] “Complete genome sequence of the metabolically versatile plant growth-promoting endophyte, Variovorax paradoxus S110.”  Han J.I.et.al.   21183664

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MRQIDSSRTA MTPVPHPPRG DFALNARLLR ITVMAIVVGA VSTVAARVLL DLIRFFTNLF 
61:	FFQTFSLADR SPAGHTLGAW VIAVPVIGGL IVGLVARYGS DKIRGHGIPE AIEAILFGKS 
121:	KMSPKVALLK PLSSGIVIGS GGPFGAEGPI IMTGGAIGSL IAQHFHLTAA ERKALLVAGA 
181:	TAGMTAVFGT PVAAVLLAVE LLLFELRPRS LLPVAVACAV AGFTRPLLMD AGPLFPLQTA 
241:	VPGPLAMLSC VAAGLLCGAL SASLSISLYK VEDLFGKLPI HWMWWPAIGG LAVGIGGYFE 
301:	PRALGVGYDV IGDLLHNHLA LGVVAALLAV KAVIWVISLG SGTSGGVLAP LLMMGAGLGV 
361:	VLSHVLPGND PMLWPLVCMA ATLGGVMRAP LTATIFAFGL THDSNALLPL LTTSAVAYGF 
421:	TVLTMRRSIL TEKIARRGYH IYREYGVDPL ERHSVEEVMT REVRSIDAAL PVARALFEHF 
481:	GDGQAHRAFP VVRNGTVIGV ADRAMLAACG TRDPIATVGD ACADVPLFFA LPGENCRAVA 
541:	TRLARHRLER LPVVKDAQSL VLVGIVARSD LIKPSLAHFD EEEKRERMRG LPWQA