TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.5.3.4
Zinc transporter 1 (ZRT/IRT-like protein 1) (OsZIP1)

Accession Number:Q94DG6
Protein Name:Zinc transporter 1
Length:352
Molecular Weight:37447.00
Species:Oryza sativa subsp. japonica (Rice) [39947]
Number of TMSs:9
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Zn2+

Cross database links:

eggNOG: NOG84653
Entrez Gene ID: 4326394   
Pfam: PF02535   
KEGG: osa:4326394   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0046873 F:metal ion transmembrane transporter activity
GO:0006829 P:zinc ion transport

References (4)

[1] “Differential metal selectivity and gene expression of two zinc transporters from rice.”  Ramesh S.A.et.al.   12970480
[2] “The genome sequence and structure of rice chromosome 1.”  Sasaki T.et.al.   12447438
[3] “The map-based sequence of the rice genome.”  International rice genome sequencing project (IRGSP)et.al.   16100779
[4] “The rice annotation project database (RAP-DB): 2008 update.”  The rice annotation project (RAP)et.al.   18089549

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MARTMTMRVS SLLVAVVLLA ALSFQACSGH GGINDGDGQV DAPATPASSS GVRSKGLIAV 
61:	KVWCLVILLV FTFAGGVSPY FYRWNESFLL LGTQFAAGVF LGTALMHFLA DSTSTFKGLT 
121:	TNQYPFSFML TCVGFLLTML SDLVIAAVAR RSAAAGVSDN QVSEQQQRQQ AEGAVMSRKE 
181:	EEAAAVAHPA MLVRTSSFED AVLLIVALCF HSVFEGIAIG VSASKSEAWR NLWTIGLHKI 
241:	FAAVAMGIAL LRMIPKRPFL MTVVYSLAFA VSSPVGVGIG IAIDATSQGR AADWTYAISM 
301:	GLATGVFIYV AINHLIAKGY RPHHPTAADK PLFKFLAVLL GVAVMAVVMI WD