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2.A.6.2.3
Isoflavonoid efflux pump, IfeB

Accession Number:O68441
Protein Name:IfeB*
Length:1046
Molecular Weight:112417.00
Species:Agrobacterium radiobacter [358]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Isoflavonoid

Cross database links:

Pfam: PF00873   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “An isoflavonoid-inducible efflux pump in Agrobacterium tumefaciens is involved in competitive colonization of roots.”  Palumbo J.D.et.al.   9620959

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MARFFIDRPI FAWVIAIIIM GLGVLSIMRL PISQYPSIAG PSVVIGATYP GASAETVADT 
61:	VVQIIEKEMT GLDGLRYIDS STTSTGRATV TLTFNLGTDP DIAQVQVQNK LSQAEASLPS 
121:	EVTRQGVTVE KSTTGFLMVI ALISDDGARS AIDLADYLNS YMVEPVSRLK GVGKVEVFGS 
181:	EYAMRIWLDP QKLKYYGLSP TTVIHAISAQ NAQISAGSFG AMPAPEGQQL NATVTAQSLL 
241:	KTPQDFERIV LRADTDGGLV LLRDVARAEL GTENYEISSF YNGKPSSGVA IQLASGANAL 
301:	ETAELVKAKM ADLGAFLPAG VSYVIPYDTT PFVSLSIEAV IHTLIEAIVL VVFVMLIFLH 
361:	NFRATLIPTL AVPVVLLGTF GIMAALGFSI NTLTMLAMVL AIGLLVDDAI VVVENVERIM 
421:	RDEHLDPVAA TKNRWEKSRA RSWASPWWFP PSSCRWRFSA VQQGEMYKQF SVTIVAAMAL 
481:	SVLVALIFTP ALCATMLKAH DHNAKSGLAS RFSNWFERNF SWLTTRYGNV VRASAKRPLR 
541:	MFLVYLLLVG AMVFLYQKTP TSFLPDEDQG TLMTIIQTPP GSTAQNTEAV LGKVENYYMN 
601:	AEAQNVESVF SVSWFLLAGQ GQNMGMMFVK LKDWEERKGK ENSAQAIAAR AFGPLMGGIK 
661:	EAIVVPLVPP AVTELGNSNG FTAFLQARSG QSHEQLLEAR NMLLGLAAQS PKLMAVRPNG 
721:	VEDASQFELN IDWGKAGAVG LSAADVGSFL TTVWSSSYVN DFLYEGRMKR VYVQGEPLAR 
781:	TGPEDLALWR VPNANGDFVD LSTIASQNWV FGPQQVIRYD ALPAMSIEGS AAPGFSSGEA 
841:	LAEIEALAAK LPPGFSLQWT GMSLEEKDAG AGALPLYGLA LATMFLCLAA LYESWTIPVA 
901:	VLLAMPVGIL GALLGAWIGG QSNGVYFQVG LLTVVGLTGK NGIMIVEFAR ERMAQLGESA 
961:	FEAVCQAAKL RFRPILMTSL AFGLGVIPLV ISTGAGAGAR QAIGYATFFG TVTGTLLAIV 
1021:	FVPVFFVLIS GIFSRRSVKA AEPKTA