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2.A.6.2.37
Detergent exporter, VexD (Bina et al., 2008b).

Accession Number:A6P7H1
Protein Name:Multidrug efflux transporter VexD
Length:1016
Molecular Weight:110833.00
Species:Vibrio cholerae [666]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Secreted1
Substrate detergents

Cross database links:

Pfam: PF00873   

Gene Ontology

GO:0016020 C:membrane
GO:0005215 F:transporter activity
GO:0006810 P:transport

References (1)

[1] “Molecular Cloning and Characterization of All RND-Type Efflux Transporters in Vibrio cholerae Non-O1.”  Rahman M.M.et.al.   18037783

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MDIARYTLAK RTSVWVLIAL TLIGGYISYL KLGRFEDPEF VIRQAVIVTP YPGATAQEVS 
61:	DEVTDVIEGA VQALQELKEV KSVSMQGRSE VTVEIKLEFA KSSAQLQQVW DKLRRKVADA 
121:	QCQLPPGTGA SIVNDDFSDV YALFYAVTGE GFSDKQLQDY VDTLRRELVL VPGVAKAATL 
181:	AEQQEAIFIE MSSERMAEFG LSVERVLQVL QKQSLVTVAG SVDAQQMRIP VIPKSNISSL 
241:	VDLTNLQVAV GSNNAVVRLG DIANISRGYT EPASMLMRYN GQRAIGFGIS NVTGGNVVEM 
301:	GDAVKARLAE LESQRPLGMD LHVISMQSDS VRASVANFID NLIAAVAIVF VVLLLFMGVR 
361:	SGVIIGFVLL LTVAGTLCVM LIDDIAMQRI SLGALIIALG MLVDNAIVVT DGVLVRFQQD 
421:	PNADKQQVVS EVVNATKWPL LGGTVVGIFA FSAIGLSPSD MGEYAGSLFW VILYSMFLSW 
481:	VFAVTVIPML CHDFLRVKAP TKEAKPSKLV TGYKAVLQWV LSHRVVSCAM LLGTLVAAVW 
541:	GAQFIPPGFM PESQRPQFVV DVYLPQGSDI RRTEQVIASI EKDVAQKDGI TNITSFIGGG 
601:	GLRFMLTYSP EARNPSYGQL LIDIDDYTKI APLVGELQNE LDAKYPDASI KVWKFMLGRG 
661:	GGKKIEAGFK GPDSHVLRQL AEQAKAIMHN DPNLIAVQDD WRQQVPVLQP VYSAQEAQRL 
721:	GLTTQEISAA IAQTLNGRNV GVYREGNDLI PLMVRAPENE RHHERAIENS EVFSAQAGRY 
781:	VPVSQLVDSV DTVYQDALLR RINRTPTILV QADPAPGVMT ADAFNNVREK IEQIELPAGY 
841:	ELIWYGEYKA SKDANEGLAL SAPYGFAAMI LAVVFMFNAL RQPLVIWMTA PFAVVGVTIG 
901:	LIAFQTPFEF MAILGFLSLI GMMVKNAIVL VDQADAEIRE GKEAYFAIID AAVSRARPVL 
961:	LGAFTTILGV APLLVDPFFK SMAVTIMFGL LFATILTLVV IPLFYAVLFR VKVAKA