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2.A.6.4.4
SecDF of 1254 aas and 12 TMSs

Accession Number:AGR42061.1
Protein Name:AGR42061.1 bifunctional preprotein translocase subunit SecD/SecF [Spiroplasma diminutum CUAS-1]
Length:1255
Molecular Weight:
Species:Spiroplasma diminutum CUAS-1 [1276221]
Number of TMSs:14
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MIKLNNNEKK ITNRSRKPIF KTIAMLIIIC SLILGMFFSS LKFSENIKLG SDFKGYYSAL 
61:	VAVDNLNEES STNGQPNGDS SEGAKALNER LNPMGNNQII IEKAGKNFLK VLSPVEAYQS 
121:	ETIFKNQIQK NGGIVLLNSE TYKDLQITGT DTIERKGINE YFTGAKASSI KDSNLKEPAI 
181:	SYSLNGDTFK TLLTGGSEEQ EGGGSSSLGL FILLDADGFY NDIRNYYNLI KGDKEDRIEE 
241:	FFKVIINPMR DIYKDSSKSD KVKQILFDLF YGEWSEKTSS GVNVTYRGSL IDPTSAPNNA 
301:	LLDSKGFLEI VDTFKYVSET SKYVYDSNAV TKDFQTAGRY ESKVKLWTSA NVETPSTMRV 
361:	DELFSEINPT ILNFAKEYQN SFNSQFLNNI KTSYFLFDGT VTETKTGAGA GYIENNNLIT 
421:	KVDTETKSRV GASLFNASGK GFVFTVNSIA TINGKVTNLM LISAIIFILI IIICMIVYMG 
481:	FFYRILGLFS MIITLSIIGI TLLSLSWFNL TVGPETIISA FILITLNMEI FSALFESMKE 
541:	SFFLKQRGLK TSFNISIKEN IGIAADLVIA LLIPTMCMFW ISSNAIRSMA IMLAMGSFFT 
601:	VLFTILIAII LFKLLMNSQL ITNKAYLFAL NTDFASQGNF IINYKITRLQ NKISKLKSKS 
661:	NFNKELLKKF EDRLNKLNEK LNFIKIKDEE KSNKKQLLIK EKINKKIDKY NLNIEKLNKD 
721:	KSAKKIQSLN FKISELIFLR DDQTQNIIEK EGEIEISPTE KLKIKTIEKN IKSGAKIISL 
781:	FSIIMLSLSI VLGFVFGLNF DSTFGGRTDY TLWGDNTSEL YYKISDENFD DYTHGNEDKL 
841:	KEIYNYKTDL IEAHEKFKAE NSNLIDVVKL DETKTVSEFL NYVFSDSFYV DYLAQNLSSS 
901:	KAYKKNNFTV SYGDKFIFND TTTGTATNQN WITLTVYTQN LKQSAIIKRM FNNFGVDKSV 
961:	NIGSQSGFIT KAINPATMLW TLEQIAISIA VIILALIIYI LIRFKWTYYI AMIVSIIVAP 
1021:	LVTVAILTTM QVPLGNVAII GIVSSIIFTI ISLFMIFGKA RSLIASKNEV SLVNYFKKEI 
1081:	EIIYDTKSFK NQMNDELFKL KNEMRLEIKT NKLSKEEKKK LKLEFKEIKH NKKIDFKKVK 
1141:	KDNKIKINRV SKQNNYLSEV LVKTFKFGFI RCWLLIGLYS LLGILLVLSM PTIMAFGVSI 
1201:	IIGVIVACLF VLFISVPLWV LFEQIRIRNR LARKRFINGL YVSNEEQIIE GIND