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2.A.6.7.2
Gene MJ1562

Accession Number:Q58957
Protein Name:YF62 aka MJ1562
Length:388
Molecular Weight:42770.00
Species:Methanococcus jannaschii [2190]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

HEGENOM: HBG541014
RefSeq: NP_248570.1   
Entrez Gene ID: 1452470   
KEGG: mja:MJ1562   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (1)

[1] “Complete genome sequence of the methanogenic archaeon, Methanococcus jannaschii.”  Bult C.J.et.al.   8688087

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MVVLMLREIL KKVAHFSEQK PFLMLLIILI ITVFAGISAT NVKSQTAFEK MLPQDNPIIK 
61:	TLYEVRDEFG GTDVITICIK LKPSDSSDKV VDIRDPRVLK AIKELEDNLR YVDGITSVSS 
121:	PVDIIIQKNN GIVPNDIDTV KDILNKLPED KRKRIFNSDY SMTVVNAYTD AGGDQKKLMR 
181:	VMDDVNERIE ETPFPPGVEV IATGTPPMRK LMDELMKESQ SFTTTVGLIG ILIILIIYFR 
241:	KPLSSIMPLL PVLIAVIWTG GAMGLLDIPL DMATAGIGSL ILGLGIDYGI HLMHRYDEER 
301:	RKGMPIDKAI ETAVVETGTA VMATTATTVV GFLALVLAPL PMMANLGKVC ALGISFCMVV 
361:	VLTLLPALIV IEERHIMPLI KRLKGDTQ