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2.A.66.3.4
Hypothetical protein; RFT1 homologue

Accession Number:A0D5K0
Protein Name:RFT1 homologue
Length:469
Molecular Weight:53339.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:14
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate phospholipids

Cross database links:

RefSeq: XP_001445714.1   
Entrez Gene ID: 5031498   
Pfam: PF04506   
KEGG: ptm:GSPATT00013   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005319 F:lipid transporter activity
GO:0006869 P:lipid transport

References (1)

[1] “Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.”  Aury J.-M.et.al.   17086204

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MINKAGKQLT WLFALKILSR IFDLSLNILV LRDLEPGIYG LTTNLDLLTN ITLFYLKIVL 
61:	KQTYSRLKDP NQEQTQSAVN LMYFGLLITI CIAPITVLVM SYNQSVAFAK TAFLYGISAV 
121:	IDGASEPYAV QWIIQLKLNV VAKAEGLAVF MKTIVLYILL GKYTRELFQI ETVIGFGIAQ 
181:	VIYSIFIFGY IFSLSNQSKF KQLNKEGVYV VAEMKQVGYQ FTLMAFMKFL LQELEKIVMV 
241:	IYNNPIISGE FTLVSHIGSI IPRFIYVNIE QIAFNLFPKI NQEEQTQLLQ KYLKFLNLVG 
301:	ISIVSAGIPC ASAFLQIYGS QWTSDSCILA MQLYCIYIWI MGINGITESY VNSTIDTKDM 
361:	WWYRYLLIAQ TIIYSLSLVI LVQMGSSGII ISNILSMSVR IFVSFLIINK QGIKIQWNAI 
421:	MPKFMILYLL GFLFQYLTEG FQLLVLTALY YGILGLINIK TVTEVIKSN