TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.67.4.1
Orf HI0561/560

Accession Number:P44016
Protein Name:Y561 aka HI0561
Length:633
Molecular Weight:66616.00
Species:Haemophilus influenzae [727]
Number of TMSs:15
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

HEGENOM: HBG346616
RefSeq: NP_438718.1   
Entrez Gene ID: 950224   
Pfam: PF03169   
BioCyc: HINF71421:HI_0561-MONOMER   
KEGG: hin:HI0561   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015833 P:peptide transport
GO:0015031 P:protein transport
GO:0055085 P:transmembrane transport

References (1)

[1] “Whole-genome random sequencing and assembly of Haemophilus influenzae Rd.”  Fleischmann R.D.et.al.   7542800

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MYLGLKVGVT FASSIPAAVI SMAVLKFFKD SSILENNMVQ TQASSAGTLS SVIFVLPGLL 
61:	MMGYWQDFPF WQTMLICAAG GTLGVLFTIP LRRAMVVNSN LPYPEGVAAA EILKAGNHAD 
121:	GDSGVKDIAY GGVLAGLVAF LTNGLRVMAD GASAWIQTGK AAFQLPMGFS LALLGAGYLI 
181:	GIVGGIAMLI GVILTWGVAV PYFTMSEDIA ADASLIDSAM TVWKTKVRYI GVGTIGIAAI 
241:	WTLLILMKPM IEGMVHSFRM LKGGQEASEH RIDIDLSPKT MIYILIATVA LIVISLHHFI 
301:	AAAPISPELS ILLVVVCTFL AVFIGFFVAA ASGYMAGLVG SSSSPISGIG IISVIVISLV 
361:	LVSIGNASGL FETVDGQKFL TALTLFTASI VITTACISND NLQDLKTGLL VEATPWRQQV 
421:	ALIIGCFVGA LVIAPVLEIL YHAYGFSGAL PRPDMDPSQA LSAPQATLMT AISQGIFTNK 
481:	LEWTYILTGV GLGAVLITID AFLKKVSNKV FSLPVIAVGI GIYLPPSINT PVIVGAFLAW 
541:	IMARHIAKLG NKEVSAKAER FGTLFSAGLI VGESLMGVIL AFIIAASVTT GGSEAPLSLN 
601:	LENWDTIGEW FGLIVFIVGI VIFASRVLRA KKI