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2.A.69.1.5
Auxin efflux carrier #10, PIN10/SLM1 (important for development; orthologous to A. thaliana PIN1 (Zhou et al., 2011)).

Accession Number:Q673E5
Protein Name:Auxin efflux carrier component
Length:591
Molecular Weight:64060.00
Species:Medicago truncatula (Barrel medic) [3880]
Number of TMSs:10
Substrate Auxin

Cross database links:

Entrez Gene ID: 11414798   
Pfam: PF03547   
KEGG: mtr:MTR_7g08936   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0055085 P:transmembrane transport

References (2)

[1] “The PIN and LAX families of auxin transport genes in Medicago truncatula.”  Schnabel E.L.et.al.   15375694
[2] “The Medicago genome provides insight into the evolution of rhizobial symbioses.”  Young N.D.et.al.   22089132

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MISALDLYHV LTAVVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIS 
61:	TNNPYTMNYR FIAADSLQKT IILTLLFIWS RTSSRGSLEW SITLFSLSTL PNTLVMGIPL 
121:	LKGMYGDDSG TLMVQIVVLQ CIIWYTLMLF LFEYRGARIL IVEQFPDTAG SIISFKVDSD 
181:	VLSLDGKEPL QTEAEVGEDG KLHVKVRKST SSRSEIFSRR SHGVNSGVSL TPRPSNLTNA 
241:	EIYSLQSSRN PTPRGSSFNH TDFYSMVNNG RNVSPRQSNF GSLGFDEESG VAKANGNGGN 
301:	GYPAPHSAGI FSPVANKKKG HGGGAGDGGK DLHMFVWSSS ASPVSEGGIH VFRGGGDYGN 
361:	DQLNGVAHQK DYEEFGHDEF SFGNRTVANG VDKEGPVLSK LGSSSTTELH PKAGSQGEAK 
421:	PTNMPPASVM TRLILIMVWR KLIRNPNTYS SLIGLTWSLV SFRWNVVMPA IVAKSIAILS 
481:	DAGLGMAMFS LGLFMALQPR IIACGNTVAS FAMAVRFLTG PAVMAFSSFV VGLRGVLLHI 
541:	AIVQAALPQG IVPFVFAKEY NVHPDILSTG VIFGMLIALP ITLVYYILLG L