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2.A.69.1.6
Putative auxin efflux carrier component 8 (AtPIN8)

Accession Number:Q9FFD0
Protein Name:Putative auxin efflux carrier component 8
Length:351
Molecular Weight:38573.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Auxin

Cross database links:

Genevestigator: Q9FFD0
eggNOG: NOG85075
HEGENOM: HOG000238224
Entrez Gene ID: 831515   
Pfam: PF03547   
KEGG: ath:AT5G16530   

Gene Ontology

GO:0005783 C:endoplasmic reticulum
GO:0016021 C:integral to membrane
GO:0080161 F:auxin transmembrane transporter activity
GO:0010252 P:auxin homeostasis
GO:0009734 P:auxin mediated signaling pathway
GO:0080162 P:intracellular auxin transport

References (1)

[1] “Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically assigned P1 clones.”  Sato S.et.al.   9330910

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA 
61:	HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW SITSFSLCTL TNSLVVGVPL 
121:	AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE 
181:	TVVVGEKSFL EVMSLVWLKL ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA 
241:	GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI 
301:	IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H