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2.A.7.2.2
Hypothethical protein

Accession Number:Q9V003
Protein Name:PYRAB09950 aka PAB0665
Length:137
Molecular Weight:14387.00
Species:Pyrococcus abyssi [29292]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

HEGENOM: HBG376528
RefSeq: NP_126672.1   
Entrez Gene ID: 1496345   
Pfam: PF00892   
BioCyc: PABY272844:PAB0665-MONOMER   
KEGG: pab:PAB0665   

Gene Ontology

GO:0016020 C:membrane

References (1)

[1] “An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.”  Cohen G.N.et.al.   12622808

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKGYILYAIL SAFFASLVPI FGKLGLKNVD ATLATTIRAV IMAIFLVGVA FLTGSTKGSL 
61:	TAKNLLFIAF SGLAGALSWL FYFMAIKEGK VPAVVAIDKT SVALAVFLSW LILGENMNIK 
121:	TAIGALLIVI GAILVSV