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2.A.7.21.2
Putative exporter

Accession Number:P76111
Protein Name:Inner membrane protein YdcZ
Length:149
Molecular Weight:15855.00
Species:Escherichia coli [83333]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

Genevestigator: P76111
EchoBASE: EB3532
EcoGene: EG13769
eggNOG: COG3238
HEGENOM: HBG299320
DIP: DIP-11659N
RefSeq: AP_002070.1    NP_415964.1   
Entrez Gene ID: 946008   
Pfam: PF04657   
BioCyc: EcoCyc:G6758-MONOMER    ECOL168927:B1447-MONOMER   
KEGG: ecj:JW1442    eco:b1447   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005515 F:protein binding
GO:0006928 P:cellular component movement

References (3)

[1] “The complete genome sequence of Escherichia coli K-12.”  Blattner F.R.et.al.   9278503
[2] “Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.”  Hayashi K.et.al.   16738553
[3] “Global topology analysis of the Escherichia coli inner membrane proteome.”  Daley D.O.et.al.   15919996

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MNQSLTLAFL IAAGIGLVVQ NTLMVRITQT SSTILIAMLL NSLVGIVLFV SILWFKQGMA 
61:	GFGELVSSVR WWTLIPGLLG SFFVFASISG YQNVGAATTI AVLVASQLIG GLMLDIFRSH 
121:	GVPLRALFGP ICGAILLVVG AWLVARRSF