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2.A.7.24.13
Protein of unknown function (claimed to have extra cytoplasmic N- and C-termini (Västermark et al., 2011)). The 10 TMSs occur in a 6+4 arrangement.

Accession Number:Q57UU3
Protein Name:Putative uncharacterized protein
Length:418
Molecular Weight:46607.00
Species:Trypanosoma brucei brucei (strain 927/4 GUTat10.1) [999953]
Number of TMSs:10
Substrate Unknown

Cross database links:

eggNOG: COG0697 COG0697
HEGENOM: HBG523787 HBG523787
Entrez Gene ID: 3656551   
Pfam: PF06027   
KEGG: tbr:Tb927.4.320    tbr:Tb927.4.320   

References (4)

[1] “Comparative genomics of trypanosomatid parasitic protozoa.”  El-Sayed N.M.A.et.al.   16020724
[2] “The genome of the African trypanosome Trypanosoma brucei.”  Berriman M.et.al.   16020726
[3] “Comparative genomics of trypanosomatid parasitic protozoa.”  El-Sayed N.M.A.et.al.   16020724
[4] “The genome of the African trypanosome Trypanosoma brucei.”  Berriman M.et.al.   16020726

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MRKSALKLLP LYVLFGQLVA LLNSFTGVST TKLINNNASY PVLQSLTAYA FIFTFYGPLY 
61:	LFLFLRHRHE TFKNFTLLYR PWKYFFLGLV DSQANFVIVK AFQYTDLVSA QLLICFSIPC 
121:	VLVLSYFILK MRFSITHITG CVVATGGLVL LILLDADGIS RTEVGPNALK GDLLCLLAAS 
181:	LYAVSNVFME YLIKPGNSNV QFPSAGGGST PRDRIAESNC ETTINEHKHE GETVNVSPRL 
241:	TATEVAGEGE SRDVPAYIPV IESISFMSCF ALVIATIQFF VVEWDGFNSR TQVWTSEDWL 
301:	YQMLFGFSML LVYTGIPALF FMKSAVFGNV SLLATSVYGI IWNVVFFRIY PTPVFFAAYV 
361:	LIIIGVLVYA LSDVRWRWCP RANYPCGDTP LLANSDATQR GGENMERSLA TGNRNGLP