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2.A.7.25.5
The permease-related protein (PRP) (335 aas; 9TMSs)

Accession Number:Q9LIR9
Protein Name:PRP
Length:335
Molecular Weight:36292.00
Species:Arabidopsis thaliana (Mouse-ear cress) [3702]
Number of TMSs:9
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

Genevestigator: Q9LIR9
eggNOG: KOG2922
HEGENOM: HBG390220
RefSeq: NP_189029.1   
Entrez Gene ID: 821970   
Pfam: PF05653   
KEGG: ath:AT3G23870   

References (1)

[1] “Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.”  Salanoubat M.et.al.   11130713

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MDQMSPDNIN GVILAVSSSI FIGSSFIIKK KGLKKAGASG VRAGEGGYGY LKEPWWWAGM 
61:	ITMIVGEVAN FAAYAFAPAI LVTPLGALSI IFSAVLAHFI LKEKLHMFGI LGCILCVVGS 
121:	TTIVLHAPHE QKIESVKQIW QLAIEPGFLV YSAVIVIVVA ILIFYYEPRY GKTHMIVYVG 
181:	ICSLMGSLTV MSVKAVAIAI KLTFSGTNQF KYFNTWIFIL VVATCCILQI NYLNKALDTF 
241:	NTAVISPVYY VMFTTFTIIA SMIMFKDWAS QSGLKIATEL CGFVTILSGT FLLHKTKDMG 
301:	NSASGRGSIS MPTRDTPVFT NSGSGRSSSS DKVAS