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2.A.7.26.2
MA_3936 (4 TMSs)

Accession Number:Q8TJ52
Protein Name:MA_3936
Length:155
Molecular Weight:17952.00
Species:Methanosarcina acetivorans [2214]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

RefSeq: NP_618807.1   
Entrez Gene ID: 1475829   
Pfam: PF02694   
BioCyc: MACE188937:MA3936-MONOMER   
KEGG: mac:MA3936   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (1)

[1] “The genome of Methanosarcina acetivorans reveals extensive metabolic and physiological diversity.”  Galagan J.E.et.al.   11932238

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MIELGVSLCP FFLAALFEIR GGYLICLWLR NNMRAVFGPL GRLMLAVCGI IPTFQPSHFG 
61:	RVYAAHGGIF IVFSLIWDLF VDKKIPDRYD HRGNNNVCGC FHYVLRLSLI GRYSVISFCN 
121:	FQTPRQRISD FFLSRSIKHN FYLFFCNQTL GNYFV