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2.A.7.3.1
Putative acetate efflux pump, MadN (Berg et al. 1997).

Accession Number:O06933
Protein Name:MadN
Length:287
Molecular Weight:31791.00
Species:Malonomonas rubra [57040]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Acetate

Cross database links:

Pfam: PF00892   

Gene Ontology

GO:0016021 C:integral to membrane

References (1)

[1] “Sequence of a gene cluster from Malonomonas rubra encoding components of the malonate decarboxylase Na+ pump and evidence for their function.”  Berg M.et.al.   9128730

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MPYLTIMTFV WAFSFSLIGV YLAGQVDAYF SVLIRVSLAA LVFLPFMRSV SLKIALKLMV 
61:	LGGIQLGCMY VFYYQSFLLL TVPEVLIFTI LTPIYVTLIF DLMQGCFSHR YLLTAVLAVV 
121:	GAFIIRYSNV GDNVLAGFFV VQGANICFAL GQVGYKLLIE REKLELSQRS VFGYFYLGAL 
181:	IIASTAWAIF GNPEKLPATS LQWGILVYLG VIASGIGYFL WNKGATKVDT GVLAIMNNAL 
241:	IPAGLIVNLL IWNRDADLVR LFIGGSIIAL SLILHEFWGK TKKLRFA