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2.A.7.3.17
Putative transporter of 10TMSs (TMSs 5-10 are possibly homologous to TMSs 1-6 in LanG (9.A.29.1.1)). LanG shows limited sequence similarity to ABC porters.

Accession Number:Q5L5M5
Protein Name:Putative inner membrane protein
Length:339
Molecular Weight:37920.00
Species:Chlamydophila abortus [83555]
Number of TMSs:10
Substrate Unknown

Cross database links:

HEGENOM: HBG413920 HBG413920
Entrez Gene ID: 3338193   
Pfam: PF00892   
KEGG: cab:CAB620    cab:CAB620   

Gene Ontology

GO:0016020 C:membrane

References (2)

[1] “The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.”  Thomson N.R.et.al.   15837807
[2] “The Chlamydophila abortus genome sequence reveals an array of variable proteins that contribute to interspecies variation.”  Thomson N.R.et.al.   15837807

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MFVNHSQTKQ SRNFALGLFH SLLACLYWGI VFVIPNLLES FQELDIVLTR YTIFGIFSLI 
61:	PVLWKRQNIF KNITLKIWGQ SFLWAFLVNV VYYFGIALAI RYVGAAITII IAGLAPIAVL 
121:	FHSNIKKKEL SYSLLSAISC VIFLGVVLTN LSEFHATTAT NPLHYFLGLA CVIFSTGIWV 
181:	AYIICNYDFL LKNPNISPEL WCTMLGISSL VICLPLIIIF DCLNITHIAQ NFITHTPISE 
241:	RLLFILLCSA MGILSSSRAI LSWNKASLHL SPALLGAILI FEPIFGLILS YLYERSLPSL 
301:	QEGIGIFLML GGSLVCLILF GRKTSQKEAE NNKVLPFVD