TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.7.3.25
Protein PagO

Accession Number:O30646
Protein Name:Protein pagO
Length:304
Molecular Weight:33622.00
Species:Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) [99287]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG0697 COG0697
HEGENOM: HOG000219630 HOG000219630
Entrez Gene ID: 1253381    1253381   
Pfam: PF00892    PF00892   
KEGG: stm:STM1862    stm:STM1862   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (4)

[1] “Identification of PhoP-PhoQ activated genes within a duplicated region of the Salmonella typhimurium chromosome.”  Gunn J.S.et.al.   9712687
[2] “Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.”  McClelland M.et.al.   11677609
[3] “Identification of PhoP-PhoQ activated genes within a duplicated region of the Salmonella typhimurium chromosome.”  Gunn J.S.et.al.   9712687
[4] “Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.”  McClelland M.et.al.   11677609

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRKVSISILF MLVSLTWGTT WLAMRIAVET IPPVFATGMR FMFAAPFLII IAWLRKKTLL 
61:	FPPGQRLFQF VICIFYFCIP FSLMIYGETY VNSGLAAIIF ANMPVAVLIA SVLFLNEKAK 
121:	LMQIAGLTIA ITALTGILLE ETNTSTESHW QGITALISAV LIHAIIYTQC KKRSCTVSVI 
181:	TFNALPCLLA GLILSATGWF FERPQVSTFS VHSILATLYL GAFAGVFGIL CYFALQQKAN 
241:	AFQASLVFLI FPLIAVSLED YIYGYAISTH SMLLIIPLVI GIFLTLVARN LPVTSRCRDN 
301:	SSQK