TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.7.3.74
The putative tryptophan efflux protein, YcbK

Accession Number:P42243
Protein Name:YcbK
Length:312
Molecular Weight:33969.00
Species:Bacillus subtilis [1423]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate

Cross database links:

HEGENOM: HBG344748
RefSeq: NP_388136.1   
Entrez Gene ID: 938405   
Pfam: PF00892   
KEGG: bsu:BSU02540   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0006810 P:transport

References (2)

[1] “Determination of a 21548 bp nucleotide sequence around the 24 degrees region of the Bacillus subtilis chromosome.”  Ogawa K.et.al.   7704254
[2] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MRAEEQSKIR EAAAGTIFLL IGTVCFASKS IWIKWAYQMG AEPDAVLLYR QLLAVPLFWL 
61:	IFLIYRPPMP DGKKKGDLWK ACGAGVFCFF LSPLLDFIGL NHVSAMVERI LLMSYPLFVF 
121:	GFTACRDRKM SSIQDLFAVL AVMFGLFLAL GGWNAELFQA NMIGAVFILL SSAVYAGYLV 
181:	LSGHLVHQIG GIRLNAYGMT AAGAAMMLYT GIKSAAGMNT PMAAYPLSMY GLFAVIAVVT 
241:	TVIPFVLMLE GIKRIGAQRA AAISMAGPIL TIFYGALFLG ERLGLIQVIG CGGVFFVITG 
301:	MEYRKLKTGK KE