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2.A.7.8.1
Hypothetical protein, Yrr6

Accession Number:Q10000
Protein Name:Yrr6 aka R144.6
Length:345
Molecular Weight:36897.00
Species:Caenorhabditis elegans [6239]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: meNOG09386
HEGENOM: HBG560734
RefSeq: NP_498062.2   
Entrez Gene ID: 175678   
Pfam: PF07857   
KEGG: cel:R144.6   

Gene Ontology

GO:0016021 C:integral to membrane

References (1)

[1] “Genome sequence of the nematode C. elegans: a platform for investigating biology.”  The C. elegans sequencing consortiumet.al.   9851916

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MSIAVGLSAC ALSSVLFGSM FVPVKKCHSG NGIFVQWIMS TAILLVGIVV YSTQGFPEFE 
61:	PLAMLGGMFW ALGNATAVPI MNTIGIGMGM LVWGTTNCVA GWAAGRFGLF GINSTVPEYP 
121:	FLNYFGLVLV VFGGFLFSQI RPNEPQTASE RSPLMVAPDD DLTDDVAPDD SDIVVPRGGA 
181:	VPTRAHRNQK RLLAIITSLV AGVFYGFTFV PVIYIQDHPE IYPTAPKTGL GYVFSHYIGI 
241:	FCTASALMIG YVIYSRNNPF ASSRLVGPSM TAGSMWGIAQ ASWFVANDNL SQAVSFPIIS 
301:	MVPGVIAALW SVFYFRDISG SRNLRLLSIA VAITLIGAIC VGVSK