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2.A.81.2.1
Homologue of AspT (384 aas; 10 putative TMSs; with potential membrane embedded loops between TMSs 4 and 5 and TMSs 9 and 10 (the two halves are internally duplicated)). The central hydrophilic domain in 2.A.81.1.1 is absent in this homologue.

Accession Number:O52005
Protein Name:AspT homologue
Length:384
Molecular Weight:39531.00
Species:Halobacterium salinarium [2242]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate L-aspartate

Cross database links:

HEGENOM: HBG096448
RefSeq: NP_046046.1   
Entrez Gene ID: 1446880   
Pfam: PF06826   
BioCyc: HSP64091:H1224-MONOMER   

References (2)

[1] “Genome sequence of Halobacterium species NRC-1.”  Ng W.V.et.al.   11016950
[2] “Snapshot of a large dynamic replicon in a halophilic archaeon: megaplasmid or minichromosome?”  Ng W.V.et.al.   9847077

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MAFIDTLVGS GVFVMFLAVV VGMAFGRINF GRGIKFGVAG PLFAGLVLGH FGFTVPDAYS 
61:	GLTLALFVAA VGLIAAHEIE GTVKTYGLNF IAISVLMPTI AAILTYVWVV VVFPNASTGL 
121:	IMGSFSGALT SSPGLGSAIE ALPEAAAQQY QIGHSVGYVI GVLIIVMFQQ LYPKLSGMNL 
181:	DAEKQQFSEK VSDIAENANI EVVTFSVLGF ALVLATGTVL GSIPIPLGPI GVITLGTTGG 
241:	VLITALVLGY LGKIGPVTMR METTILSEIR AFTLAMFLAV VGIDAGSGLV ETIAEYGVEI 
301:	VVTAGLNSIV AIIGGLVLTR VIWKMDWIHA AGGITGGHTD TKGLAAAIDA TGADEVAAGY 
361:	GNTYPFALLA MVIYAKILVA VIPL