TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.85.1.5
Uncharacterized transporter YdhK

Accession Number:Q8ZPN4
Protein Name:Uncharacterized transporter YdhK
Length:679
Molecular Weight:76474.00
Species:Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) [99287]
Number of TMSs:12
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG1289
HEGENOM: HOG000283450
Entrez Gene ID: 1252959   
Pfam: PF04632   
KEGG: stm:STM1441   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0006810 P:transport

References (1)

[1] “Complete genome sequence of Salmonella enterica serovar Typhimurium LT2.”  McClelland M.et.al.   11677609

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKLSLPALRN TPWFKATSGQ WRYALRNTIA MCLALTFAYY LNLDEPYWAM TSAAVVSFPT 
61:	VGGVISKSLG RIAGSLLGAT AALIIAGHTL NEPWLFLFSM AAWIGFCTWA CAHFTNNAAY 
121:	AFQLSGYTAA IIAFPMVNIV EITQLWDIAQ ARVCEVIVGI LCGGMMMMIL PSTSDGTALL 
181:	TAFKNMHARL LEHASLLWQP ETTDAIRSAH EGVIGQILTM NLLRIQAFWS HYRFRRQNAL 
241:	LNALLHQQLR LTSVISSLRR MLLNWPTPPE NSREVIEQLL AELAKPRADS YTVAQIIAPL 
301:	RPQDEQDYRH LAFWQRLRYF CQLYLRSSRQ LYLIESGAPV DQIHIRRTPG LARHTDNAEA 
361:	IWSGVRTFCT LTVIGAWSIG AQWESGPGAL TLAAISCVLY SIVATPFKSL SLLMRTLVLL 
421:	SLFSFVVKFG LMVQITDLWQ FLLFLFPLFV TMQLLKLQMP KLAGLWGQLI VFMGSFIAVT 
481:	NPPVYDFADF LNDNTAKIVG VAISWLAFAI LRPGSDAVKS RRHIRALRRD FVDQLSRHPS 
541:	HNESEFESLT YHHVSQLSNS QDALARRWLL RWGVVLLNCS HVVWQLRAWE SRSDPLSRVR 
601:	DICISLLRDV MSERGVQQRP LAVTLQELQR ICDTLAHHHQ PAAHELAAII WRLHCSLSQL 
661:	EQAPAQGTLA PGYLMTPQA