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2.A.85.5.1
5 or 6 TMS 'half sized', YqjA

Accession Number:P54538
Protein Name:YqjA aka BSU23950
Length:322
Molecular Weight:37032.00
Species:Bacillus subtilis [1423]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

HEGENOM: HBG399355
RefSeq: NP_390275.2   
Entrez Gene ID: 938681   
Pfam: PF06081    PF11728   
KEGG: bsu:BSU23950   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (3)

[1] “Systematic sequencing of the 283 kb 210 degrees-232 degrees region of the Bacillus subtilis genome containing the skin element and many sporulation genes.”  Mizuno M.et.al.   8969508
[2] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377
[3] “From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later.”  Barbe V.et.al.   19383706

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MFKIGYRTIK TALGTALAIY ISQLLHLQNF ASAGIITILC IQITQKRSLQ ASWARFSACC 
61:	LAIAFSYLFF ELIGYHPFVI GALLLIFIPI TVLLKINEGI VTSSVIILHL YMSGGITPTF 
121:	IWNEVQLITV GIGVALLMNL YMPSLDRKLI AYRKKIEDNF AVIFAEIERY LLTGEQDWSG 
181:	KEIPETHQLI TEAKNLAYRD VQNHILRYEN LHYHYFKMRE KQFEIIERLL PKVTSISITV 
241:	DQGKMIAEFI HDLREAIHPG NTAYKFLKRL ADMRKEFEEM PLPATREEFE ARAALFHLLG 
301:	EMEQYLVIKS YFKGIKAQKS LG