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2.A.88.1.8
The distant BioY homologue (183 aas; 6 TMSs)

Accession Number:Q2KUS5
Protein Name:BioY-family membrane protein
Length:183
Molecular Weight:18810.00
Species:Bordetella avium (strain 197N) [360910]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Biotin

Cross database links:

HEGENOM: HBG672824
RefSeq: YP_785602.1   
Entrez Gene ID: 6265156   
Pfam: PF02632   
KEGG: bav:BAV1079   

References (1)

[1] “Comparison of the genome sequence of the poultry pathogen Bordetella avium with those of B. bronchiseptica, B. pertussis, and B. parapertussis reveals extensive diversity in surface structures associated with host interaction.”  Sebaihia M.et.al.   16885469

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MTNRNLVLAA LFAALMVVLS LMPPVPLPAI PVPVTLQTLG VMLAGIMLGP WRGAAACLLY 
61:	LVLAAIGLPV LPGGRGGLGV FVGPTGGFLM GMLLGVVVAG LLARALARGG MWRMLGGYLL 
121:	ACLVGGVAAV YAVGVPWLAA VTQMGLAKAA LAVVVFLPGD LVKALVAAWV AWRVERVWPL 
181:	LRR