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2.A.88.8.2
YhhQ transporter (Duf165)

Accession Number:P54163
Protein Name:Uncharacterized protein ypdP
Length:229
Molecular Weight:25671.00
Species:Bacillus subtilis (strain 168) [224308]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate Unknown

Cross database links:

eggNOG: COG1738
HEGENOM: HOG000238544
Entrez Gene ID: 939075   
Pfam: PF02592   
KEGG: bsu:BSU21980   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane

References (2)

[1] “Organization of the Bacillus subtilis 168 chromosome between kdg and the attachment site of the SP beta prophage: use of long accurate PCR and yeast artificial chromosomes for sequencing.”  Capuano V.et.al.   8969496
[2] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MFNNSFWIFF AIIHFIIVLL FYKGFGKMGL FVWIGFATVC ANLQVVKTVE LFGLTATLGN 
61:	VMYGTIFFAT DVLNEKYGPA EARKAVWLGF STLLTLTFVM QGVLLFEPAS SDISQTALET 
121:	IFGFLPRVAL GSLLAFIFSQ TLDVYVYSAI RRIFPSDRLL WLRNGGSTAV SQLFDTFIFT 
181:	AVAFLGIYPA DVWLHIFIST YLIKFAVSLI SLPYAYAAKK MIPNDERSS