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2.A.88.8.4
Duf165 transporter (229 aas; 5 TMSs)

Accession Number:Q8PW04
Protein Name:Transporter
Length:229
Molecular Weight:25476.00
Species:Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) [192952]
Number of TMSs:5
Substrate Unknown

Cross database links:

eggNOG: COG1738
HEGENOM: HOG000238544
Entrez Gene ID: 1480142   
Pfam: PF02592   
KEGG: mma:MM_1800   

References (1)

[1] “The genome of Methanosarcina mazei: evidence for lateral gene transfer between Bacteria and Archaea.”  Deppenmeier U.et.al.   12125824

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MLTIFISSLL LGNLLGGKLV EIFGIVTSVG LFGYPPTFLI TDIVEEVKGR EVTKIFVHAG 
61:	FLSLCIALFF IFVSTGLPPS PLYPHNEAYN HVFSGSLRII LASMIAFLIS QYHDIWAFNF 
121:	WKKKTNGRCL WLRNNLSTIV SQLLDSTVFM FIAFYHAGPE MGAAAIFSMI LPLWILKVIF 
181:	ALLDTPFVYL GVKWLASGEE KENLHPDEGR ETGIVKGQET PGSLNRSGL