about | faq
TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


2.A.89.3.10
The archaeal VIT family homologue

Accession Number:Q9UY73
Protein Name:VIT aka PYRAB16350
Length:364
Molecular Weight:40719.00
Species:Pyrococcus abyssi [29292]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Golgi apparatus membrane1 / Multi-pass membrane protein2
Substrate Fe2+

Cross database links:

HEGENOM: HBG616254
RefSeq: NP_127309.1   
Entrez Gene ID: 1495925   
Pfam: PF01988    PF02915   
BioCyc: PABY272844:PAB1273-MONOMER   
KEGG: pab:PAB1273   

Gene Ontology

GO:0016491 F:oxidoreductase activity
GO:0046914 F:transition metal ion binding
GO:0055114 P:oxidation reduction

References (1)

[1] “An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.”  Cohen G.N.et.al.   12622808

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence 
1:	MDKMIRLAME FYKNELSDSV LYAELAKYEK DEKVREEFLR LSRIEAQHAK FWERFLEKRG 
61:	VKPEKPSVGK IKRFSVRLLR RLLGPGLTVS FLEMGENNAI NSYFNFLVSN AKAFDEEEVK 
121:	ALKMIIFEEL EHEKFFSEAK KRFHVENLRD FVLGMNDGLV EILGAVTGLS AVYPNLPRLV 
181:	GISGLIVGVA GALSMAIGAL ISVRSQRQVS ESIRNRTKII FQVSPERAVQ EIYERLREGG 
241:	LPEDIAREVS EKLSQRGEAV IKLLVPEEDE NEFRAALYTG VAYLFGVMFP ITPYFLASSS 
301:	LTALPLSVTL AGLALAIVAT SISLISGISI RKKVAEMVVT GLGAAFLSYL FGHLMESIFH 
361:	VSAL