TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.109.3
LapA adhesin protein exporter, LapB (Hinsa et al., 2003)

Accession Number:Q88RG3
Protein Name:LapB
Length:718
Molecular Weight:78584.00
Species:Pseudomonas putida (strain KT2440) [160488]
Number of TMSs:6
Location1 / Topology2 / Orientation3: Cell membrane1 / Single-pass membrane protein2
Substrate LapB protein

Cross database links:

eggNOG: COG2274
HEGENOM: HBG298315
RefSeq: NP_742336.1   
Entrez Gene ID: 1043691   
Pfam: PF00664    PF00005   
KEGG: ppu:PP_0167   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005524 F:ATP binding
GO:0042626 F:ATPase activity, coupled to transmembrane m...
GO:0008233 F:peptidase activity
GO:0006508 P:proteolysis
GO:0055085 P:transmembrane transport

References (1)

[1] “Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.”  Nelson K.E.et.al.   12534463

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MESEVSRVQL SHDPRSQHDD PLLDSLLSLC VLHQKPASRV MLTTGLPLPA QRLSPELLPR 
61:	AAARAGLQGR LLQRKLEQIP SIAMPAMLLL KEGRSAVLLG WENDDTARLL LSESDGGEVH 
121:	VSREALLSDY SGRVFFAQPQ HKFDVNHGNL IPRAKSWFRD TLLRSKWLYI DAIAASLVIN 
181:	LIALAAPLFV MNVYDRVVPN QATSTLWVLA IGIAGAYIFD LILKGLRGLC LDLAGKKTDL 
241:	IISATLFERI VGMSMKYRPA RVGSFAQNIH EFQGLRDFLA SLTLTSLIDL PFTILILIVI 
301:	AIIGGHLVWI PIIAFPLALG IGYALQRPLM ATMERTMALA SERQSSLIET LAGLDAVKVN 
361:	NAESERQYMW EQTLGTLSRL ELRVKVLSSL AMNITLLIQQ LAGVAMICVG VYLIIDGNLS 
421:	MGGLVACYML SGRALGPLGQ LNGLLARYQQ AKVTMVSTDH MMDLPQERNF EERPLSRKVL 
481:	QGSVEFRGVD FTYPNQQNLA LKNINLTIRP GEKVGIIGRS GSGKSSLAKL IVGLYEADGG 
541:	SLLVDGVDIR QIDVSELRHN IGYVPQDIQL LAGTLRDNLV SGARYIEDEL ILQAAELAGV 
601:	HEFARLHPDG YELQVGERGQ NLSGGQRQNV ALGRALLLNP QILLLDEPTS AMDNTGEERL 
661:	KQRLQAVVEG KTVLLVTHRA SLLSLVDRLI VIDRGQIVAD GPKAAVMDAL KKGQISVA