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3.A.1.110.10
The AlgE-type Mannuronan C-5-Epimerase exporter, EexD (PrtD) (Gimmestad et al., 2006).

Accession Number:C1DS84
Protein Name:Type I secretion system ATPase
Length:580
Molecular Weight:62956.00
Species:Azotobacter vinelandii (strain DJ / ATCC BAA-1303) [322710]
Number of TMSs:6
Substrate Mannuronan C-5-epimerase

Cross database links:

Entrez Gene ID: 7760559   
Pfam: PF00664    PF00005   
KEGG: avn:Avin_16240    avn:Avin_16240   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0030256 C:type I protein secretion system complex
GO:0005524 F:ATP binding
GO:0042626 F:ATPase activity, coupled to transmembrane m...
GO:0008565 F:protein transporter activity
GO:0030253 P:protein secretion by the type I secretion s...
GO:0055085 P:transmembrane transport

References (2)

[1] “Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes.”  Setubal J.C.et.al.   19429624
[2] “Genome sequence of Azotobacter vinelandii, an obligate aerobe specialized to support diverse anaerobic metabolic processes.”  Setubal J.C.et.al.   19429624

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MRNVRENSLQ AALKICKGSF ISVGFFSFFV NALMLVPSFY MLQVYGRVLT SGSITTLLML 
61:	TLIMTALMVT MGSLEWTRSR IMVRISSRLD ALLGRDVYRA SFKRALDSGG MDASAQPLND 
121:	LTGLRQFLTG AGLFAFFDAP WLPVYIGVMF FFHPWYGWIA IASAIVLLCL AALNEKLTGK 
181:	ALAEANKQNI AANLYTTKNL RNAEVIQSMG MLHSLIARWS VRQNKVLHLQ SVASDKSGFI 
241:	TSLSKTFRML VQSLILGVGA YLAVKQEINP GLMIAGSLLL GRALAPIDMM IGGWKGFITA 
301:	RSQYARLNEI LDRQKSEQER MSLPAPEGRV QVENLVVGAP GSKTPILKNI SFTVPAGSVV 
361:	GIIGPSASGK STLARALLGV WAPQHGVVRL DGADINNWDK RELGPHIGYL PQDIELFEGS 
421:	ISENIARFGE IEPDKVIQAA RMAGVHEMIL QLPDGYDTVI GSEGISLSGG QRQRVGLARA 
481:	LYGNPRLLVL DEPNSNLDDV GERALASAIR QIKATDATIF IITHRTNILA QLDSLLVMHN 
541:	GTLALSGPRD KVLAELAAQQ QTDLAKQARI SPDAAQAGKA