TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.121.3
Antibiotic (virginiamycin and lincomycin) resistance protein, VmlR

Accession Number:P39115
Protein Name:Nucleotide binding protein expZ
Length:547
Molecular Weight:62738.00
Species:Bacillus subtilis [1423]
Location1 / Topology2 / Orientation3: Cell outer membrane1 / Lipid-anchor2
Substrate Virginiamymycin, Lincomycin

Cross database links:

HEGENOM: HBG758042
RefSeq: NP_388442.1   
Entrez Gene ID: 938053   
Pfam: PF00005   
KEGG: bsu:BSU05610   

Gene Ontology

GO:0005524 F:ATP binding
GO:0016887 F:ATPase activity

References (1)

[1] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKEIVTLTNV SYEVKDQTVF KHVNASVQQG DIIGIIGKNG AGKSTLLHLI HNDLAPAQGQ 
61:	ILRKDIKLAL VEQETAAYSF ADQTPAEKKL LEKWHVPLRD FHQLSGGEKL KARLAKGLSE 
121:	DADLLLLDEP TNHLDEKSLQ FLIQQLKHYN GTVILVSHDR YFLDEAATKI WSLEDQTLIE 
181:	FKGNYSGYMK FREKKRLTQQ REYEKQQKMV ERIEAQMNGL ASWSEKAHAQ STKKEGFKEY 
241:	HRVKAKRTDA QIKSKQKRLE KELEKAKAEP VTPEYTVRFS IDTTHKTGKR FLEVQNVTKA 
301:	FGERTLFKNA NFTIQHGEKV AIIGPNGSGK TTLLNIILGQ ETAEGSVWVS PSANIGYLTQ 
361:	EVFDLPLEQT PEELFENETF KARGHVQNLM RHLGFTAAQW TEPIKHMSMG ERVKIKLMAY 
421:	ILEEKDVLIL DEPTNHLDLP SREQLEETLS QYSGTLLAVS HDRYFLEKTT NSKLVISNNG 
481:	IEKQLNDVPS ERNEREELRL KLETERQEVL GKLSFMTPND KGYKELDQAF NELTKRIKEL 
541:	DHQDKKD