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3.A.1.122.13
Putative ABC3-type antimicrobial peptide transporter, fused ATPase-porter protein, U-ABC3-1b (667aas; 4TMSs:1+3)

Accession Number:Q03RZ6
Protein Name:U-ABC3-1b
Length:667
Molecular Weight:71648.00
Species:Lactobacillus brevis (strain ATCC 367 / JCM 1170) [387344]
Number of TMSs:5
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate Antimicrobial peptides

Cross database links:

eggNOG: COG0577
HEGENOM: HBG693448
RefSeq: YP_795057.1   
Entrez Gene ID: 4413016   
Pfam: PF00005    PF02687   
KEGG: lbr:LVIS_0889   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0005524 F:ATP binding
GO:0016887 F:ATPase activity

References (1)

[1] “Comparative genomics of the lactic acid bacteria.”  Makarova K.S.et.al.   17030793

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MATLQLKDIH KSYYLGKEEF PVLKGIDLDF NLGEFVSILG ESGGGKSTLM NIIGGLDREF 
61:	QGEVQLKGKP IDHRNEKSLD RFRRETIGYI YQAYNLVNHL TVLDNVLISL DMTTLTKEQR 
121:	VDRANHLLER VGLAEQAKKY PNQLSGGQKQ RVAIARALAS DPQIIIADEP TGALDSQNTA 
181:	EVLDILNDIA KEGRLVITVT HSQAVADAGT RIVQLVDGKI DSDTSIRQPY PVTGDAERLT 
241:	ARKLPARVSY QTAFKHFKFT FGQNFLIMLG TAIGLFAVIL FSGLGNGLSG YINEQITNVA 
301:	NPQVVSVSRH TRSTSNANKQ QTQAESQRAA MGMGTTTAKP KTFSQTQISQ IRQLKHVTKV 
361:	EKSYSLTDVK IKHGKKSVTT STASNWTSSA TTSSIKVGHK PQAGEIVLDK TAVAKQLNKK 
421:	DWKSLIGKTV TVSYSTANAN NRPTKVTFKA KVAGIAESST GAMSITAVNT NTLVKALNKA 
481:	NVSTKPAALA VSIDKLGSVN GVVKQINKLK NDGTKLYAAT SITSLISTVQ TYVHLASSIL 
541:	AAIAAISLIV SALMIIVTMY MSVSARTKEI GILRALGESK ADIRRLFISE SLIIGVLSAV 
601:	LATVIALGLG ALANTMLSKI ASYAFIQITL GNIITTFVIA IVIALIAAYL PARHAASLNP 
661:	IDALSAD