TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.1.122.5
ABC transporter of unknown function (DUF214 protein) (4TMSs)/ABC protein [Msed1528/Msed1530]

Accession Number:A4YGY2
Protein Name:Msed1528
Length:409
Molecular Weight:42877.00
Species:Metallosphaera sedula (strain ATCC 51363 / DSM 5348) [399549]
Number of TMSs:4
Location1 / Topology2 / Orientation3: Mitochondrion1
Substrate Unknown

Cross database links:

eggNOG: arNOG10841
HEGENOM: HBG553265
RefSeq: YP_001191608.1   
Entrez Gene ID: 5104056   
Pfam: PF02687   
KEGG: mse:Msed_1528   

Gene Ontology

GO:0016020 C:membrane

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MKLSDVVNFS FKALTSKKLR TSLTILGILI GPAIVVGLTG LTLGFSSVLT HQLFSSLSPT 
61:	DIFVTPGTST ITPYTIQEIS HIPGVKAVVP FYLISGTIET PSGPMATEIL SISTSQASEV 
121:	FPGLTLQQGQ YPSPYSSYGA VVGYYIAHPQ YPGQPTYQVG QTITVVMNTP NGKITKTFLV 
181:	TGSFNEFSSA FADIDKALVV QNIVGSQYYG DQYSGLIVEA SSVSQVNNVV NSIHNELGRS 
241:	VSVTSVEQFI TLINNSLSAV NGLLFVAGAS SFIVAFVGIL STMFTTVVER TREIGVLRAI 
301:	GFTRRGIMVI FVTEAILMGL LGGTAGVGAG VGMGYLLTTL TNSGGPGAGR GSAAASGGLG 
361:	ISAHITPVFE PTFIAEVILI TVIFSLFAGI IPAYRASRIE PAVALRYEV