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3.A.1.136.2
ABC-type antimicrobial peptide transporter of 421 aas and 4 TMSs

Accession Number:Q6MNW8
Protein Name:ABC-type antimicrobial peptide transporter, permease component
Length:421
Molecular Weight:46466.00
Species:Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100) [264462]
Number of TMSs:4
Substrate Antimicrobial peptides

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MMVFLKLAIK SLKNRAFATT LTVISIALSV ALLLTVERAK RAAEEGFTQT ISKTDLIVGA 
61:	RSGPLQLILY TVFNMGNATH NISYETYEKV KAHPAIEWTI PYSLGDGHRG FRVVGTTQDF 
121:	FKHYHYRGDQ QVKFAQGKEF ADIWDVVVGA DVARKLKYSL GDRIVVAHGV TKGEGILQHD 
181:	DRPFVISGIL EPTGTPLDRA VYMSLQGMEA LHVDWQDGAA PAMDKVIPRE QLTNELKVHT 
241:	ITAFFVGAKS RIETLKLQRE INTYEGEPLL AIIPGATLSE LWNGLSYVEG VLRMISWMVV 
301:	AVGFMAMLIA LTTTLNERRR EMAILRAVGA KSNQILGLLV FESALLTAVG VALGLVTSWG 
361:	LIAVLKPWIE TEFGLYLVGP WVTRYELMYL IITLVGGTLI GLIPALRAQK LALKDGLSVR 
421:	I