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3.A.1.201.28
MDR1 alkaloid/multiple drug efflux transporter of 1292 aas and 12 TMSs (Shitan et al. 2003). 

Accession Number:I0J0H5
Protein Name:ABC protein
Length:1292
Molecular Weight:139619.00
Species:Coptis japonica (Japanese goldthread) [3442]
Number of TMSs:12
Substrate

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAEENGFNGD QNNHLQATAS TSHSPAKLTN KTSGSTKSDQ QDSDKGEGVE KMSAETVPYY 
61:	KLFSFADSKD LVLMVIGTIA SVANGASMPI MTFLVGDLIN AFGQNANNKN TLPVVSRVAL 
121:	RFVYLAVGAG VASVFQVACW MVTGERQASR IRSLYLKTIL RQDVAFFDKE TNTGEVVGRM 
181:	SGDIVRIQDA MGEKVGKFIQ LFSTFIGGFI VAFVRGWLLT LIMLSSIPVL VISGAFVTIV 
241:	VSKMASRGQA AYSQAAITVE QTIGSIRTVA SFSGEKHAIT QYEKSLQKAY KSGVHEGLAS 
301:	GLGLGASMLI FFCSYALAIW FGGRMIIEKD YTGGDIINII DAILVGSFSL GQASPCLSAF 
361:	AAGQAAAFKM FETIKRKPEI DSYDTKGRVL DDIHGDIELK DICFSYPARP DEQIFSGFSL 
421:	SLPSGTTSAL VGESGSGKST VISLIERFYD PQAGEVLIDG INLKEFQLRW IRQKIGLVSQ 
481:	EPVLFASSIK DNIAYGKDGA TLEDIKAAAE LANAAKFIDK LPQGLDTLVG EHGTHLSGGQ 
541:	KQRVAIARAI LKDPRILLLD EATSALDAES EHIVQEALDR VMVNRTTVVV AHRLSTIRSA 
601:	DMIAVVHRGK IVEKGSHSEL LKDPDGAYSQ LIRLQEVNRS SENKAESTEF GRSSSHQQSF 
661:	RRSMSRGSSG VGNSSRKSFS MSFGLPTPHI PEVVSAKPES TPEPKKQTEE VPLLRLASLN 
721:	KPEIPILLLG AISAAINGLI FPIFGVLLAS VIKTFYKPED ELRKDSRFWA LMFIVLGIAS 
781:	FVASPAGTYF FSVAGCRLIQ RIRSMCFEKV VHMEINWFDE PEHSSGAIGA KLSSDAASVR 
841:	SLVGDALSLL VQNAASAIAG LAIAFEANWI LALIILVLLP LIGLNGYLQT KFMTGFSADA 
901:	KMMYEEASQV ASDAVGSIRT VASFCAEEKV MQLYKKKCEG PMKTGIRQGL ISGIGFGVSF 
961:	FLLYNVYATS FYVGARLVED GKTTFAEVFR VFFALTMAAL GISQSSSFAP DSSKARASTA 
1021:	SIYGILDRKS KIDSSDDSGI TLENLNGDIE LRHVSFKYST RPDIQILRDL SLAIRSGKTV 
1081:	ALVGESGSGK STVISLLQRF YDPDSGYITL DGVEIQKLQL RWLRQQMGLV SQEPVLFNET 
1141:	IRANIAYGKE GDATETEILA AAELANAHKF ISALQQGYDT MVGERGVQLS GGQKQRVAIA 
1201:	RAMVKAPKIL LLDEATSALD AESERVVQDA LDKVMVNRTT IVVAHRLSTI KNADLIAVVK 
1261:	NGVIVEKGKH DHLINISDGV YASLVALHMT AS