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3.A.1.207.1
The hypothetical protein, HP (1209aas; 10TMSs:1+6+3; 2-4 are homologous to 8-10; the FtsX domain) (P. tetraurelia has at least 5 paralogues.)

Accession Number:A0ECD9
Protein Name:Chromosome undetermined scaffold_89, whole genome shotgun sequence - Paramecium tetraurelia.
Length:1209
Molecular Weight:139244.00
Species:Paramecium tetraurelia [5888]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Host nucleus1
Substrate Unknown

Cross database links:

RefSeq: XP_001460353.1   
Entrez Gene ID: 5046138   
Pfam: PF02687   
KEGG: ptm:GSPATT00025   

Gene Ontology

GO:0016020 C:membrane

References (1)

[1] “Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia.”  Aury J.-M.et.al.   17086204

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAQPNEDQPS LAELQSTQPQ RLIRLFFKYI LSDIAKRPRS FKIGLLSTYI VIAFLGLLQC 
61:	LKSLSPFLFL QLAETSVGDT DLQFLPKTLA SKNDFRLINI TELRQYTSQI DEFLDVSPRW 
121:	LFMCDIYNPK ASLNLTSFFM ILDSQLENSI GLGRRLDTDI ITSNQIYISN TLQKGLGVQI 
181:	GDTIQIKFSV LQFLKHFGFN NTEGESKNHL RESFKRFLND LLQISDDDIL HRKFDVATML 
241:	KYVEEYKYFV NDLEASEWKK NQTKKSLIQS IYSQNITTPQ KKLAKQMVDY IFTRNLTKDA 
301:	RSMYRFVFRL SKFTKEITIS QIEDGFFDIA IEIAEFELNF SVYQSVESPK GKWTEALGMM 
361:	VFMDYKDATS LFLDAILDRF DAVIKQKRKY DQGMAGAVSQ LIPVKETRNS VRDKLKHFQL 
421:	QEYSLMANVV FQNKYPKYET PENAKAAVIS STNQFYSIAG YDYPVQIMAP LGFIVELYHL 
481:	IKHFIDTLIQ VATIILLMLS ILLIYSLMIG DVDEKTYEFG MLRALGFRKS WLIVLLLFQA 
541:	LTFAIPGLLL ALITCYLLNA LVSMYIFDMS LLISSYSIPL YALIVQISIG ICMPIVSNIL 
601:	PIKQALSTTL RDSLNLLHKV VSNIVVTVMR LEKIGISLNQ TIYSIMLISI GFISYYVIPM 
661:	NIIYQNVGLA IFVLNIVFVT MLIGVTMIIN LVQKIVEKYL LYLILCLKSS DQNLKPVILN 
721:	NLKSHENRNA KTTLMYSLGL SLIIFTGSSF AIMSQMMQNY IKVSTAADIR IFDASKKFGL 
781:	DEYGLRQHLE WEQKNDSTLI KDYTFSALPL NEYPGIQNHF SISPLSRFPR NLIILQPVEK 
841:	NLLNSITLEY YQPTEYDTES SDVKYLDNGV RDGIYDLYNR DSNYDMKQQK DISGIISNSK 
901:	YYQIFEPKQK TIKIDREINI IIPEGYRNAG SISVNTPALL TIKNKEYMIE KRLKIRHMAT 
961:	KIPNFDFSAY TTVVFFGQGL ITMQDAELLL KEILNNRAVR KSRKYRKLKE FIEQLPKNLS 
1021:	FGLPKDQLFI KFNRDTTREE RLDFSNRMRN YFKNDQIYLI DSQELMRTFD EVFTYFEIFN 
1081:	AVVAAIALIL SFFLLLISFI SNVRNNCWEI GILRAIGLQE VQIQKVFIYE SISLIVSSGL 
1141:	IGSLVGFITA STFAMQIATF SESQFRLAFP LYTFLFTFLG GILIAVASSY LAVRQLKNKE 
1201:	IAFILKNQI