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3.A.15.2.2
α-helical pore-forming toxin-coregulated pilus biosynthesis protein E, TcpE, of 340aas and 3TMSs with an internal repeat (Kolappan and Craig 2013).

Accession Number:P0C6C9
Protein Name:Toxin coregulated pilus biosynthesis protein E
Length:340
Molecular Weight:38068.00
Species:Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) [243277]
Number of TMSs:3
Location1 / Topology2 / Orientation3: Cell inner membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

Structure:
4HHX     

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MKIISKKYRL ELYSMLVDLL NDNIPLYDAL NKIQNEGVGI YDKNFIKSIE LIKDRMKSNS 
61:	SLTDALTGLI PDKEVLMINV AENSGKISSG IAAIRKNIID ADEIKSKAIS SMITPSVMLI 
121:	VTMVVIAGYS VKVFPTFESV LPVSRWPGVT QALYNLGFSL YEGLWIKVLI FVAIFITILV 
181:	FMSKNITGNF RDGFLDKLPP FNFVKHIAAT EFLANMSMLL DSRVPFKEGL DIVDHKTTRW 
241:	LSSHLQRMKA NMQEGLDYKQ ALDTNLLDKK MLLTMAVYSE LPNFSDVMQK LAIEANINLH 
301:	KKIATLAGVM KNISLITLAL SVIWIFGAIF SLVDKLSSSL