TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.A.5.2.1
SecY

Accession Number:P16336
Protein Name:SecY
Length:431
Molecular Weight:47243.00
Species:Bacillus subtilis [1423]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

HEGENOM: HBG565931
RefSeq: NP_388017.1   
Entrez Gene ID: 936779   
Pfam: PF00344   
KEGG: bsu:BSU01360   

Gene Ontology

GO:0016021 C:integral to membrane
GO:0005886 C:plasma membrane
GO:0015450 F:P-P-bond-hydrolysis-driven protein transmem...
GO:0015031 P:protein transport
GO:0055085 P:transmembrane transport

References (5)

[1] “Isolation of a secY homologue from Bacillus subtilis: evidence for a common protein export pathway in eubacteria.”  Suh J.-W.et.al.   2110998
[2] “Sequence of the Bacillus subtilis spectinomycin resistance gene region.”  Yoshikawa H.et.al.   2139212
[3] “Cloning and characterization of a Bacillus subtilis gene homologous to E. coli secY.”  Nakamura K.et.al.   2113521
[4] “Genetic and transcriptional organization of the Bacillus subtilis spc-alpha region.”  Suh J.-W.et.al.   8635744
[5] “The complete genome sequence of the Gram-positive bacterium Bacillus subtilis.”  Kunst F.et.al.   9384377

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	MFKTISNFMR VSDIRNKIIF TLLMLIVFRI GAFIPVPYVN AEALQAQSQM GVFDLLNTFG 
61:	GGALYQFSIF AMGITPYITA SIIIQLLQMD VVPKFTEWSK QGEVGRRKLA QFTRYFTIVL 
121:	GFIQALGMSY GFNNLANGML IEKSGVSTYL IIALVLTGGT AFLMWLGEQI TSHGVGNGIS 
181:	IIIFAGIVSS IPKTIGQIYE TQFVGSNDQL FIHIVKVALL VIAILAVIVG VIFIQQAVRK 
241:	IAIQYAKGTG RSPAGGGQST HLPLKVNPAG VIPVIFAVAF LITPRTIASF FGTNDVTKWI 
301:	QNNFDNTHPV GMAIYVALII AFTYFYAFVQ VNPEQMADNL KKQGGYIPGV RPGKMTQDRI 
361:	TSILYRLTFV GSIFLAVISI LPIFFIQFAG LPQSAQIGGT SLLIVVGVAL ETMKQLESQL 
421:	VKRNYRGFMK N