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3.A.5.9.2
Sec61α (3-D structure known) (Azad et al., 2011)

Accession Number:G9M9M7
Protein Name:Sec61 alpha subunit
Length:478
Molecular Weight:52150.00
Species:Penicillium ochrochloron [69780]
Number of TMSs:10
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate proteins

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSGLRFLDLI KPFTPLLPEV AAPETKVPFN QKLMWTGLTL LIFLVMSQMP LYGIVSSDTS 
61:	DPLYWLRMML ASNRGTLMEL GITPIISSGM VFQLLAGTHL IDVNLDLKTD RELYQTAQKL 
121:	FAIILSFGQA CVYVLTGLYG QPSDLGAGIC VLLIVQLVVA GLVVILLDEL LQKGYGLGSG 
181:	ISLFIATNIC ESIVWKAFSP TTINTGRGPE FEGAIIALFH LLLTWPDKRR ALYEAFYRQN 
241:	LPNVMNLLAT LLVFAAVIYL QGFRVEIPVK SARQRGMRGS YPVRLFYTSN MPIMLQSALS 
301:	SNVFLISQML YSRFSDNLLV RLLGVWEPRE GSAQLYAASG IAYYMSPPLN FKEALLDPIH 
361:	TAVYIAFMLV ACALFSKTWI EVSGSAPRDV AKQLKDQGLV MSGHREQSMY KELKRVIPTA 
421:	AAFGGACIGA LSVASDLLGA LGSGTGILLA VTIIYGYFEI AAREGDIGAG LKGLVPGS