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3.E.1.1.7
H+-pumping electrogenic bacteriorhodopsin of 250 aas and 7 TMSs (Kamo et al. 2006).

Accession Number:O93740
Protein Name:Bacteriorhodopsin
Length:250
Molecular Weight:27041.00
Species:Haloterrigena sp. (strain arg-4) [160432]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MCCAALAPPM AATVGPESIW LWIGTIGMTL GTLYFVGRGR GVRDRKMQEF YIITIFITTI 
61:	AAAMYFAMAT GFGVTEVMVG DEALTIYWAR YADWLFTTPL LLLDLSLLAG ANRNTIATLI 
121:	GLDVFMIGTG AIAALSSTPG TRIAWWAIST GALLALLYVL VGTLSENARN RAPEVASLFG 
181:	RLRNLVIALW FLYPVVWILG TEGTFGILPL YWETAAFMVL DLSAKVGFGV ILLQSRSVLE 
241:	RVATPTAAPT