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3.E.1.3.3
Sensory rhodopsin II, SR2 (Sop2), also called phoborhodopsin. The NMR solution structure of the detergent solubilized protein is in good agreement with the x-ray structure (Gautier et al. 2010).

Accession Number:P42196
Protein Name:Sensory rhodopsin-2
Length:239
Molecular Weight:25355.00
Species:Natronomonas pharaonis (Natronobacterium pharaonis) [2257]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Cell membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

Structure:
1GU8   1GUE   1H2S   1H68   1JGJ   2F93   2F95   3QAP   3QDC   4GYC   [...more]

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MVGLTTLFWL GAIGMLVGTL AFAWAGRDAG SGERRYYVTL VGISGIAAVA YVVMALGVGW 
61:	VPVAERTVFA PRYIDWILTT PLIVYFLGLL AGLDSREFGI VITLNTVVML AGFAGAMVPG 
121:	IERYALFGMG AVAFLGLVYY LVGPMTESAS QRSSGIKSLY VRLRNLTVIL WAIYPFIWLL 
181:	GPPGVALLTP TVDVALIVYL DLVTKVGFGF IALDAAATLR AEHGESLAGV DTDAPAVAD