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3.E.1.3.4
Sensory rhodopsin III, SRIII, of 232 aas and 7 TMSs (Fu et al. 2010).

Accession Number:Q5V4H7
Protein Name:Sensory rhodopsin III
Length:232
Molecular Weight:25084.00
Species:Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) [272569]
Number of TMSs:7
Location1 / Topology2 / Orientation3: Membrane1 / Multi-pass membrane protein2
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAQEIVWYGA GAGAFFVSAV VFVWFAATRG NIRSSFYYLP PIHTSVAGAA YVAMALIAGG 
61:	QLGDTVSITT LRFADWIVST PIITYYLARL AGVDTQTRRL AVAANVVMIG VGYGFVSMSG 
121:	SLRWIAFAVS TVAFIGLLYL YIKTFARKIN AATASVRSLF QSLRDLTVVT WSLYPVVYFL 
181:	GPLGTGIIQA PDLNFLVAVL DTIAKVGFMS ILLVRYNSVE TFVDSWSVAP AK