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3.E.1.4.5
Opsin 1, Bacteriorhodopsin-like protein

Accession Number:Q2QCJ4
Protein Name:Opsin 1
Length:249
Molecular Weight:27018.00
Species:Guillardia theta [55529]
Number of TMSs:7
Substrate H+

Cross database links:

Pfam: PF01036   

Gene Ontology

GO:0016020 C:membrane
GO:0005216 F:ion channel activity

References (1)

[1] “Rhodopsin-mediated photoreception in cryptophyte flagellates.”  Sineshchekov O.A.et.al.   16150961

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
Window Size: Angle:  
FASTA formatted sequence
1:	QQLAAQSLAP TACTTIEEVG STGVGALTIT FLILAVSTII FITRVGPATS QKVYYYCNVF 
61:	ICGLATMSYF AMLSGQGWTA VAGCRQFFYA RYVDWTITTA LIILELGLIA GAEPALIGGV 
121:	MGADVIMIVG GYLGTVSIVT TVKWFWFVIS MALFVVVLYA LAVNFRDSAL QKGNDRADVY 
181:	GRLAWLTIVS WIFYPVVWLF SDGFASFSVS FEVCAYSILD IASKAIFGFM VMSAHGILET 
241:	GTTMNQEYV