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3.E.1.4.7
Cyanorhodopsin of 334 aas and 7 TMSs, Ops1 (Frassanito et al. 2010).

Accession Number:C8CHH8
Protein Name:Opsin
Length:334
Molecular Weight:37596.00
Species:Cyanophora paradoxa [2762]
Number of TMSs:7
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MSPTFARWYQ TYATNNKNRQ SAFVPNGQCS FTYEQFASFY SGSYIKDPES VQLAIQRTCY 
61:	NRITGLGPDF YSPEDAADRG QVFFWIEFGI QAVMFALFLI LTLRREEHKR RFHYITTLYS 
121:	GISTMAYYCM ARGQGSVALF DTWSNGDFSP YRVFYYARYI DWFLTVPLII LNLCLLASAT 
181:	KALTIGLALS GMLMVGTGLM GALSITGTKW GWFGISNMCF LPIVVAWVTV LRKNAREKSP 
241:	EVEKTYNILI IISIIAWFAY PIIWIIATGT HAISLAAEIV SYAVVDTFSK ALFGVILLFS 
301:	RSAIEDASFK DPEKMKLPTS YTSSTIHSGV LSKA