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3.E.1.6.6
Proton pumping proteorhodopsin of 253 aas (Kimura et al. 2011).

Accession Number:L7W6K7
Protein Name:Proteorhodopsin
Length:253
Molecular Weight:28130.00
Species:Nonlabens dokdonensis (strain DSM 17205 / KCTC 12402 / DSW-6) [592029]
Number of TMSs:7
Substrate H+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MNFLLSTLEV AKMATDDYVG FTFFIGSMAM MAASAFFFLS LSQFDNKWRT SVLVSGLITF 
61:	IAAVHYFYMR DYYAATDSSP TFFRYVDWTL TVPLMCVEFY LILKVAGAKL GLMWKLIFWS 
121:	VVMLVTGYFG EVIALGNPTM QWVWGLVSGI AYFIIVYMIW FGEAKKLATS AGGAVLKAHN 
181:	ILCWFVLVGW AIYPLGYILG TEGGLFGLQL VEDPKAAQEA MDVVYNIGDA INKIGFGLVI 
241:	YSLAVTSSKK VEA