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3.E.1.6.8
Proteorhodopsin of 246 aas and 7 TMSs, Pro.  A light-driven Na+ pump (Bertsova et al. 2015).

Accession Number:C0KTK1
Protein Name:Proteorhodopsin
Length:246
Molecular Weight:27607.00
Species:Dokdonia sp. PRO95 [1239415]
Number of TMSs:7
Substrate Na+

Cross database links:

External Searches:

  • Search: DB with
  • BLAST ExPASy (Swiss Institute of Bioinformatics (SIB) BLAST)
  • CDD Search (Conserved Domain Database)
  • Search COGs (Clusters of Orthologous Groups of proteins)
  • 2° Structure (Network Protein Sequence Analysis)

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
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FASTA formatted sequence
1:	MKFLLQLLLL ADPTKLDPSD YVGFTFFVGA MAMMAASAFF FLSLNQFNKK WRTSVLVSGL 
61:	ITFIAAVHYW YMRDYWFAIQ ESPTFFRYVD WVLTVPLMCV EFYLILKVAG AKPALMWKLI 
121:	VFSVIMLVTG YFGEAVFQDQ AALWGAISGA AYFYIVYEIW LGSAKKIAVA AGGDILKAHK 
181:	ILCWFVLVGW AIYPLGYMLG TDGWYTSILG KGSVDIAYNI ADAINKIGFG LVIYALAVKK 
241:	NEVEVV